BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E08LP1|AL430716
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1797 0.0
>3x_Contig1672
Length = 13609
Score = 1797 bits (905), Expect = 0.0
Identities = 906/907 (99%)
Strand = Plus / Minus
Query: 1 gatcgggcagtggccttaatgagacaygtctcattgagaaggaaagctgtacacgacgag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4670 gatcgggcagtggccttaatgagacacgtctcattgagaaggaaagctgtacacgacgag 4611
Query: 61 aacgagcaagaactagagaatatagatgagaataaacttgcgaaagtacgagcacaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4610 aacgagcaagaactagagaatatagatgagaataaacttgcgaaagtacgagcacaggcc 4551
Query: 121 actcaaaacagaggctctaacggaacagccatatcgccactgcaagacttggacatcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4550 actcaaaacagaggctctaacggaacagccatatcgccactgcaagacttggacatcgag 4491
Query: 181 ttgtttcctggtacaatccaatatagaggttttagtcaagaacaccatcttaatttacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4490 ttgtttcctggtacaatccaatatagaggttttagtcaagaacaccatcttaatttacac 4431
Query: 241 ttgaaccatacccgtaagctaccagagtacatcactccgccaagaaacgccaaattaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4430 ttgaaccatacccgtaagctaccagagtacatcactccgccaagaaacgccaaattaaag 4371
Query: 301 gatttctttgttcatgaaacacatgttaacgacaaggatcaagtcttttcgaagaccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4370 gatttctttgttcatgaaacacatgttaacgacaaggatcaagtcttttcgaagaccaca 4311
Query: 361 gatgatattaatgctaacaaagtggtgaggaaacttcaattctgcatcgatgagaacaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4310 gatgatattaatgctaacaaagtggtgaggaaacttcaattctgcatcgatgagaacaga 4251
Query: 421 tgacaagattatgtaactccaagaacgtaaatatatatcaacttgacatggaatggcatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4250 tgacaagattatgtaactccaagaacgtaaatatatatcaacttgacatggaatggcatg 4191
Query: 481 gatcctattgaaggtttgttttttcctttgaaaagaaccttttctttttcaggctggttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4190 gatcctattgaaggtttgttttttcctttgaaaagaaccttttctttttcaggctggttg 4131
Query: 541 aaaaattttgagagctcatcgcatcgaatacataaatgaccagagaacacgactctcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4130 aaaaattttgagagctcatcgcatcgaatacataaatgaccagagaacacgactctcagc 4071
Query: 601 ggagatatttaacgggtcgtattgggttaattacactattttatagcgtctataattgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4070 ggagatatttaacgggtcgtattgggttaattacactattttatagcgtctataattgat 4011
Query: 661 cgcataacattggtaagaagctaagcagttgtgtatcttggcaattatatccactgaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4010 cgcataacattggtaagaagctaagcagttgtgtatcttggcaattatatccactgaaac 3951
Query: 721 gatgggcaaggcagttaaaaagaagtacagtggagcaagttctggaggtaaagaagtgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3950 gatgggcaaggcagttaaaaagaagtacagtggagcaagttctggaggtaaagaagtgga 3891
Query: 781 tgctgagaagcatttgactacggtgttcaagtttaacactgatttagggcaacatatcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3890 tgctgagaagcatttgactacggtgttcaagtttaacactgatttagggcaacatatcct 3831
Query: 841 aaagaatccgttagttgctcaaggtatcgtggacaaggctcaaataaagccatcggatat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3830 aaagaatccgttagttgctcaaggtatcgtggacaaggctcaaataaagccatcggatat 3771
Query: 901 tgtgctt 907
|||||||
Sbjct: 3770 tgtgctt 3764
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6817
Number of Sequences: 1807
Number of extensions: 6817
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)